the 6.9 IDI and 7.3 IDI are identical only differences are the cubic inches and a few HP. As far as transmission you have a choice between a few for automatics you have the C6 its bulletproof but no OD, then you have the E4OD it has OD but its all electronic and problematic. For manuals you have the 4 speed, real simple but again no OD, then you have the ZF 5 which is the main choice of transmissions for many of us. A Zf 5 will run you about 400-700 depending if you can find a good deal. I bought mine for $400 for everything. It took a weekend to swap from auto to manual, for you it would probably take a day and a half since yours is already manual. If pricing is a big deal on your decision you should get a C6 automatic cause they are a dime a dozen, (mine is for sale for $200.) It just all depends on what you can get your hands on.